dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00283
Location and strand information: 63063 - 63503 (+)
Family: 9.B.27.3.3
Protein type: TC
Protein description: Inner membrane protein YqaA

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00284
Location and strand information: 63508 - 64167 (+)
Family: null
Protein type: null
Protein description: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00285
Location and strand information: 64045 - 64302 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00286
Location and strand information: 64512 - 67688 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00287
Location and strand information: 67706 - 69451 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00288
Location and strand information: 69471 - 70874 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00289
Location and strand information: 71019 - 72248 (+)
Family: CBM51|GH27
Protein type: CAZyme
Protein description: Alpha-galactosidase A
Protein isoelectric point: 5.5929
Protein molecular weight: 46470.91
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00290
Location and strand information: 72531 - 73379 (+)
Family: null
Protein type: null
Protein description: Manganese ABC transporter substrate-binding lipoprotein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00291
Location and strand information: 73387 - 74175 (+)
Family: 3.A.1.15.11
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00292
Location and strand information: 74172 - 76592 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.7205
Protein molecular weight: 91131.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00293
Location and strand information: 76651 - 80559 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00294
Location and strand information: 80674 - 83646 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00295
Location and strand information: 83666 - 85237 (+)
Family: 8.A.46.1.1
Protein type: TC
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00296
Location and strand information: 85256 - 86704 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00297
Location and strand information: 86719 - 87816 (+)
Family: CBM61|GH53
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0632
Protein molecular weight: 41151.73
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00298
Location and strand information: 88046 - 90511 (+)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 6.4076
Protein molecular weight: 93252.95
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00299
Location and strand information: 90508 - 91521 (+)
Family: GH53
Protein type: CAZyme
Protein description: Arabinogalactan endo-beta-1,4-galactanase
Protein isoelectric point: 5.4859
Protein molecular weight: 38622.89
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002933_3|CGC2
Gene ID: MGYG000002933_00300
Location and strand information: 91742 - 92380 (+)
Family: 2.A.1.7.17
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002933_00289	GH27_e18\|CBM51_e24
MGYG000002933_00292	GH2_e38\|3.2.1.23	beta-galactan
MGYG000002933_00297	GH53_e3\|CBM61_e11\|3.2.1.89	arabinogalactan
MGYG000002933_00298	GH2_e59\|CBM67_e9\|3.2.1.23	beta-galactan
MGYG000002933_00299	GH53_e3\|3.2.1.89	arabinogalactan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-galactan|arabinogalactan

Substrate predicted by dbCAN-PUL is beta-galactan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002933_00283	Inner membrane protein YqaA	TC	63063	63503	+	9.B.27.3.3
MGYG000002933_00284	tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC	null	63508	64167	+	Methyltransf_30
MGYG000002933_00285	hypothetical protein	null	64045	64302	-	No domain
MGYG000002933_00286	hypothetical protein	TC	64512	67688	+	1.B.14.6.1
MGYG000002933_00287	hypothetical protein	null	67706	69451	+	SusD-like_3\| SusD_RagB
MGYG000002933_00288	hypothetical protein	null	69471	70874	+	DUF6055
MGYG000002933_00289	Alpha-galactosidase A	CAZyme	71019	72248	+	CBM51\| GH27
MGYG000002933_00290	Manganese ABC transporter substrate-binding lipoprotein	null	72531	73379	+	ZnuA
MGYG000002933_00291	Vitamin B12 import ATP-binding protein BtuD	TC	73387	74175	+	3.A.1.15.11
MGYG000002933_00292	Beta-galactosidase BoGH2A	CAZyme	74172	76592	+	GH2
MGYG000002933_00293	Sensor histidine kinase RcsC	TF	76651	80559	+	HTH_AraC+HTH_AraC
MGYG000002933_00294	TonB-dependent receptor SusC	TC	80674	83646	+	1.B.14.6.1
MGYG000002933_00295	Starch-binding protein SusD	TC	83666	85237	+	8.A.46.1.1
MGYG000002933_00296	hypothetical protein	null	85256	86704	+	SusE\| DUF5111\| DUF5114
MGYG000002933_00297	hypothetical protein	CAZyme	86719	87816	+	CBM61\| GH53
MGYG000002933_00298	Beta-galactosidase BoGH2A	CAZyme	88046	90511	+	CBM67\| GH2
MGYG000002933_00299	Arabinogalactan endo-beta-1,4-galactanase	CAZyme	90508	91521	+	GH53
MGYG000002933_00300	hypothetical protein	TC	91742	92380	+	2.A.1.7.17
Protein ID	Protein Name	Type	Start	End	Strand	Signature